Tools
Open-source bioinformatics platforms and analytical tools developed by SiMPC and its partners to accelerate metabolomics, multi-omics, and translational clinical research.
MMFramework
Launched: 2026
Framework for side-by-side evaluation of clinical, metabolomics, and integrated disease classification models.
NUIMM
Launched: 2026
A comprehensive pipeline for integrating microbiome and metabolome data through multi-layered network analysis.
Metabox 2.0
Launched: 2023
A toolbox for thorough metabolomic data analysis, integration and interpretation.
SiMD
Launched: 2024
A specialized database for ion mobility–mass spectrometry research.
lmm2met
Launched: 2018
Linear mixed-effects modeling for clinical metabolomics analysis.